About

Microbiomes are complex and dynamic microbial communities which along with their metabolites, have key roles in many biological processes of their host – plant or animal – and/or of the ecosystem. The rapid development of next-generation sequencing (NGS) in the past years has enabled the study of microbiomes at a level never before seen and therefore, not only unravel their roles but also design and develop novel applications, services and products.

The aim of the Five-day Hands-on Training School on Microbiome Sequencing & Data Analysis is to provide an in-depth insight in the generation, analysis and interpretation of microbiome metagenomic sequencing data.

The curriculum of the workshop includes theoretical lectures on microbiome sequencing (amplicon 16S/ITS - shotgun metagenomics, metatranscriptomics ) as well as case studies’ presentation, plus hands-on training from metagenomic DNA to library preparation, sequencing and data analysis. Participants are welcome to bring 1-2 samples for analysis.

The Five-day Hands-on Training School on Microbiome Sequencing and Data Analysis is hosted by Next Generation Sequencing Unit, Node of the OMIC-Engine Research infrastructure at the Department of Molecular Biology & Genetics (MBG) of the Democritus University of Thrace (DUTH).

For more details see here
For the Post-School report see here

Apply Now!

Interested participants should register for this workshop by filling up the application form.
The application deadline is September 8th 2021.
Fifteen candidates will be selected and notified by email until September 10th.
Participants are welcome to bring and work with their own samples (1-2).

Programme Information

Programme

You can download the detailed Training School Programme by clicking here

F.A.Q

Frequently Asked Questions

  • Prices for accommodation in Alexandroupolis in October are in the range of 35-65 euros per single room per night.

  • In order to obtain ECTS credits you have to take an exam to demonstrate that the corresponding learning outcomes and hours of study hours for the course, training or program of study have been met. Applicants who wish to obtain ECTS credits from this Training school (2 ECTS) will need to fulfill assignments and take exams in November.

Speakers

The Speakers List

Maria Grigoriou

Professor

George Skavdis

Associate Professor

Yiannis Kourkoutas

Associate Professor

Petros Kolovos

Assistant Professor

Katerina Paleologou

Assistant Professor

Alessandro Albiero

ThermoFisher Scientific Representative

Electra Stylianopoulou

Postdoctoral Researcher

Theodora Tsirka

Postdoctoral Researcher

Maria Tokamani

Postdoctoral Researcher

Ioanna Farmakioti

PhD Candidate

Konstantinos Tegopoulos

MSc Student

Organizers

Organizing Partners

OMIC Engine

National Hellenic Research Infrastructure

Department of Molecular Biology & Genetics

Democritus University of Thrace

Organizing Committee

Prof. Maria Grigoriou

  • Department of Molecular Biology & Genetics
  • Democritus University of Thrace

Assoc. Prof. George Skavdis

  • Department of Molecular Biology & Genetics
  • Democritus University of Thrace

Assoc. Prof. Ioannis Kourkoutas

  • Department of Molecular Biology & Genetics
  • Democritus University of Thrace

Prof. Raphael Sandaltzopoulos

  • Department of Molecular Biology & Genetics
  • Democritus University of Thrace

Asst. Prof. Katerina Paleologou

  • Department of Molecular Biology & Genetics
  • Democritus University of Thrace

Dr. Electra Stylianopoulou

  • Department of Molecular Biology & Genetics
  • Democritus University of Thrace

Dr. Maria Tokamani

  • Department of Molecular Biology & Genetics
  • Democritus University of Thrace

Dr. Theodora Tsirka

  • Department of Molecular Biology & Genetics
  • Democritus University of Thrace

Contact

Contact Us

Location:

Democritus University of Thrace

Department of Molecular Biology and Genetics

Building F. Kafatos, 2nd Floor

Dragana (University Campus), Alexandroupolis


Call:

0030 25510 30674

0030 25510 30657